Relationship between Soil pH and Microbial Community Composition in Agricultural Soils

Authors

  • Hussein Ragab Cairo University

DOI:

https://doi.org/10.47672/ajns.2042

Keywords:

Soil pH, Microbial Community, Composition, Agricultural Soils

Abstract

Purpose: The aim of the study was to assess the relationship between soil pH and microbial community composition in agricultural soils.

Methodology: This study adopted a desk methodology. A desk study research design is commonly known as secondary data collection. This is basically collecting data from existing resources preferably because of its low cost advantage as compared to a field research. Our current study looked into already published studies and reports as the data was easily accessed through online journals and libraries.

Findings: The study revealed significant correlations between these two factors. Studies indicate that soil pH plays a crucial role in shaping the structure and diversity of microbial communities inhabiting agricultural soils. Generally, acidic soils tend to harbor distinct microbial populations compared to neutral or alkaline soils. Acidic conditions often favor acidophilic microorganisms, such as Acid bacteria and certain fungi, while alkaline soils may support a different set of microbial taxa. Changes in soil pH have been shown to influence microbial diversity, community structure, and the abundance of specific microbial groups involved in nutrient cycling and soil health. Understanding the intricate connections between soil pH and microbial communities is vital for optimizing agricultural practices, enhancing soil fertility, and promoting sustainable land management strategies.

Implications to Theory, Practice and Policy: Neutral theory of biodiversity, phylogenetic niche conservatism and resource competition theory may be used to anchor future studies on assessing the relationship between soil pH and microbial community composition in agricultural soils. Develop region-specific soil pH management strategies tailored to different soil types, climatic conditions, and land management practices.  Incorporate soil pH monitoring and management guidelines into agricultural policies and extension programs to promote soil health and sustainability.

Downloads

Download data is not yet available.

References

Alcolombri, U., Alavi, M., König, G. M., Singh, A., Voolstra, C. R., & Tawfik, D. S. (2021). Microbiomes of Caribbean coral reefs have distinct signatures in space and time. Environmental Microbiology, 23(3), 1360-1374. DOI: 10.1111/1462-2920.15282

Alvarez-Sanchez, F. J., Ramos-Gonzalez, M. I., Ramirez-Villanueva, D. A., Martinez-Flores, H. E., & Vazquez-Juarez, R. (2021). The role of microbial communities in agricultural soils: Impact on soil fertility, plant health and food security in tropical agroecosystems. Science of the Total Environment, 768, 144921. DOI: 10.1016/j.scitotenv.2020.144921

Birgander, J., Rousk, J., & Olsson, P. A. (2021). Microbial pH optima and their relationship to soil pH. Soil Biology and Biochemistry, 157, 108234. DOI: 10.1016/j.soilbio.2021.108234

Birgander, J., Rousk, J., & Olsson, P. A. (2021). Microbial pH optima and their relationship to soil pH. Soil Biology and Biochemistry, 157, 108234. DOI: 10.1016/j.soilbio.2021.108234

Cadotte, M. W., & Tucker, C. M. (2017). Should Environmental Filtering be Abandoned? Trends in Ecology & Evolution, 32(6), 429-437. DOI: 10.1016/j.tree.2017.03.011

Chase, J. M. (2018). Neutral theory in community ecology: a primer. Oikos, 127(5), 660-669. DOI: 10.1111/oik.05044

De Filippo, C., Cavalieri, D., Di Paola, M., Ramazzotti, M., Poullet, J. B., Massart, S., ... & Lionetti, P. (2010). Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa. Proceedings of the National Academy of Sciences, 107(33), 14691-14696. DOI: 10.1073/pnas.1005963107

Jones, H. G., & Brown, K. L. (2021). Effects of liming on soil pH and microbial communities in grassland soils. Agriculture, Ecosystems & Environment, 313, 107341. DOI: 10.1016/j.agee.2021.107341

Li, J., Li, J., Li, Y., Zhang, W., & Wang, W. (2019). Influence of long-term fertilization on soil pH and microbial communities in croplands. Applied Soil Ecology, 134, 1-8. DOI: 10.1016/j.apsoil.2018.09.010

Li, Y., Chang, S. X., Wang, L., & Zhang, W. (2020). Soil microbial community structure and function mostly respond to soil pH and nutrient management in Northeast China. Science of the Total Environment, 723, 137840. DOI: 10.1016/j.scitotenv.2020.137840

Lladó, S., & Baldrian, P. (2017). Community-level physiological profiling analyses show potential to identify the copiotrophic bacteria present in soil environments. PloS One, 12(9), e0184379. DOI: 10.1371/journal.pone.0184379

Mwirichia, R., Muigai, A. W., Tindall, B. J., & Boga, H. I. (2018). The rhizosphere microbiome: Significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms. FEMS Microbiology Reviews, 42(6), 728-739. DOI: 10.1093/femsre/fuy030

Nugroho, R. A., Widyastuti, R., & Triyono, D. (2020). Impact of agricultural intensification on microbial diversity and soil health. Journal of Environmental Management, 265, 110476. DOI: 10.1016/j.jenvman.2020.110476

Oduaran, O. H., Abia, A. L. K., & Ubomba-Jaswa, E. (2019). Human gut microbiota and the implications for health and disease in African populations. Genes, 10(9), 678. DOI: 10.3390/genes10090678

Ogunyemi, S., Abdallah, Y., & Alabi, O. A. (2019). Soil microbial diversity in Nigeria: A review. Nigerian Journal of Microbiology, 33(1), 4292-4302.

Park, S. J., Lee, H. S., & Kim, H. J. (2022). Interactive effects of soil pH and crop rotation on microbial communities in agricultural soils. European Journal of Soil Biology, 106, 103394. DOI: 10.1016/j.ejsobi.2022.103394

Pedrero-Sanz, L., Mounier, S., & Restrepo-Ortiz, C. X. (2019). Freshwater microbial communities in tropical rivers: Influence of land use and hydrological factors. Frontiers in Microbiology, 10, 535. DOI: 10.3389/fmicb.2019.00535

Rachid, C. T., Santos, A. L., Piccolo, M. C., Balieiro, F. C., Coutinho, H. L., & Peixoto, R. S. (2018). Amazonian deforestation and soil biodiversity. Conservation Biology, 32(6), 1382-1384. DOI: 10.1111/cobi.13167

Rachid, C. T., Santos, A. L., Piccolo, M. C., Balieiro, F. C., Coutinho, H. L., & Peixoto, R. S. (2018). Amazonian deforestation and soil biodiversity. Conservation Biology, 32(6), 1382-1384. DOI: 10.1111/cobi.13167

Singh, R., Singh, P., & Kumar, S. (2019). Impact of agricultural practices on soil microbial diversity and crop productivity. International Journal of Environmental Science and Technology, 16(7), 3525-3538. DOI: 10.1007/s13762-018-2029-0

Smith, A. B., Johnson, C. D., & Garcia, E. A. (2019). Impact of soil pH on microbial diversity in maize fields. Soil Biology and Biochemistry, 135, 107-115. DOI: 10.1016/j.soilbio.2019.04.016

Smith, J. L., Collins, H. P., Bailey, V. L., Bolton Jr, H., Grandy, A. S., Kravchenko, A. N., ... & Robertson, G. P. (2017). The North American long-term soil productivity experiment: Findings from the first decade of research. Forest Ecology and Management, 355, 192-204. DOI: 10.1016/j.foreco.2015.09.039

Sriprang, R., Kuekulvong, C., Luangjame, J., Tolieng, V., Mhuantong, W., Champreda, V., ... & Techkarnjanaruk, S. (2020). Metagenomics analyses of microbial and carbohydrate-active enzymes in the rumen of Thai swamp buffalo (Bubalus bubalis). Microbial Ecology, 80(1), 79-92. DOI: 10.1007/s00248-019-01390-6

Srivastava, J. K., & Kumar, R. (2018). Microbial diversity in polluted aquatic ecosystems and its exploitation for mitigation of pollution. In Microbial diversity in the genomic era (pp. 373-396). Academic Press. DOI: 10.1016/B978-0-12-814849-5.00015-2

Tanaka, T., Suto, K., Kameda, K., Shizuma, R., Kuramochi, K., Matsumoto, N., ... & Hara, Y. (2019). Urban green spaces harbor diverse microbial communities and provide ecosystem services. Urban Forestry & Urban Greening, 44, 126382. DOI: 10.1016/j.ufug.2019.126382

Tilman, D. (1982). Resource Competition and Community Structure. Princeton University Press.

Wang, Q., Zhang, H., Liu, H., & Chen, X. (2020). Global patterns of soil pH effects on microbial communities: a meta-analysis. Global Ecology and Biogeography, 29(7), 1161-1170. DOI: 10.1111/geb.13114

Wu, X., Zhu, D., & Ma, Y. (2023). Role of soil pH in shaping fungal communities in tea plantations. Soil Biology and Biochemistry, 162, 108412. DOI: 10.1016/j.soilbio.2022.108412

Zhang, Y., Wang, J., Li, Y., & Chen, Z. (2018). Relationship between soil pH gradients and microbial communities in paddy soils. Applied Soil Ecology, 124, 256-263. DOI: 10.1016/j.apsoil.2017.10.005

Zhao, Q., Zhang, R., Ding, J., & Huang, R. (2019). Responses of soil microbial community structure to different pH conditions: A meta-analysis. Frontiers in Microbiology, 10, 2165. DOI: 10.3389/fmicb.2019.02165

Downloads

Published

2024-05-25

How to Cite

Ragab, H. (2024). Relationship between Soil pH and Microbial Community Composition in Agricultural Soils. American Journal of Natural Sciences, 5(1), 44–54. https://doi.org/10.47672/ajns.2042